SubtiBank SubtiBank
yfjA [2019-06-25 11:35:39]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yfjA [2019-06-25 11:35:39]

unknown
locus
BSU08170
pI
4.86
mw
11.89 kDa
protein length
104 aa Sequence Blast
gene length
315 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    889,372 889,686

    The protein

    Protein family

  • WXG100 superfamily (pfam06013) [Pubmed|11973144]

    • Structure

  • [PDB|2VRZ] (from Staphylococcus aureus, 21% identity) [pubmed|18773907]

    • Expression and Regulation

    Operons

    genes
    [gene|A177DF098115F85F23A1D42EFB07D294B515830F|yfjA]-[gene|F130D13E1F9C03157ECF37C91F90F2487CF22B09|yfjB]-[gene|C832113D9C59F56C6CDA695B589B1E001C881ABE|yfjC]-[gene|F18F68234236D28894084695429DBF47AA061BE1|yfjD]-[gene|D0F98493600C1BED7118C83E6079AEF0B0D460FB|yfjE]-[gene|642A9A6770EF067A0EC7F51A08940C330EB3610A|yfjF]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C288 (yfjA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2286 NBRP B. subtilis, Japan]
  • BKE08170 ([gene|A177DF098115F85F23A1D42EFB07D294B515830F|yfjA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08170 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACTTTTGTCCCCTGCCTT, downstream forward: _UP4_CATAAACTCGGGAGGTGAAC
  • BKK08170 ([gene|A177DF098115F85F23A1D42EFB07D294B515830F|yfjA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08170 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACTTTTGTCCCCTGCCTT, downstream forward: _UP4_CATAAACTCGGGAGGTGAAC

    • References

  • 11973144,18773907